This HTRF kit enables the cell-based quantitative detection of p62/STSQM1 as a readout of the autophagy pathway, and can be combined with our phospho-p62/SQSTM1 Ser 403 kit.

See more
  • No-wash No-wash
  • High sensitivity High sensitivity
  • All inclusive kit All inclusive kit
  • Low sample consumption Low sample consumption

This HTRF kit enables the cell-based quantitative detection of p62/STSQM1 as a readout of the autophagy pathway, and can be combined with our phospho-p62/SQSTM1 Ser 403 kit.

-
In stock

Overview

This HTRF cell-based assay conveniently and accurately monitors the expression level of p62/SQSTM1 proteins, both phosphorylated and unphosphorylated. It uses the same buffers as our Phospho-p62/SQSTM1 kit, and enables the analysis of phosphorylated and total proteins from a single sample as a pivotal readout of the autophagy pathway. Autophagy is a cellular mechanism which enables the clearance of abnormal proteins or organelles, and plays a role in cancer, neurodegenerative diseases, as well as cardiovascular and infectious diseases.

p62/SQSTM1 is a ubiquitin–binding protein and functions as a bridge between polyubiquitinated cargo protein and autophagosomes. p62 interacts directly with both the cargo protein and a protein called LC3 which is involved in the autophagosome formation. Finally, the activated autophagy pathway promotes the degradation of p62-associated ubiquitinated protein cargoes.

Benefits

  • SPECIFICITY
  • PRECISION
  • LOW SAMPLE CONSUMPTION

Total p62/SQSTM1 assay principle

The Total-p62/SQSTM1 assay quantifies the expression level of p62 in a cell lysate. Unlike Western Blot, the assay is entirely plate-based, and does not require gels, electrophoresis, or transfer. The Total-p62/SQSTM1 assay uses two labeled antibodies, one coupled to a donor fluorophore, the other to an acceptor. Both antibodies are highly specific for a distinct epitope on the protein. In presence of p62/SQSTM1 in a cell extract, the addition of these conjugates brings the donor fluorophore into close proximity with the acceptor, and thereby generates a FRET signal. Its intensity is directly proportional to the concentration of the protein present in the sample, and provides a means of assessing the protein’s expression under a no-wash assay format.

Principle of the HTRF total p62/SQSTM1

Total-p62/SQSTM1 two-plate assay protocol

The two-plate protocol involves culturing cells in a 96-well plate before lysis, then transferring lysates into a low volume detection plate (either HTRF 384-lv or 96-lv plate) before the addition of HTRF Total-p62/SQSTM1 detection reagents. This protocol enables the cells' viability and confluence to be monitored

Total p62/SQTM1 2-plate assay protocol

Total-p62/SQSTM1 (Ser403) one-plate assay protocol

Detection of Total p62/SQSTM1 with HTRF reagents can be performed in a single plate used for culturing, stimulation, and lysis. No washing steps are required. This HTS designed protocol enables miniaturization while maintaining robust HTRF quality.

Total p62/SQTM1 1-plate assay protocol

Expression and phosphorylation of p62/SQSTM1 on Ser403 in untreated cells

Human HeLa and SH-SY5Y cells, and mouse Neuro2a cells were plated at respectively 100,000 and 120,000 and 50,000 cells/well in a 96 well plate.

After an incubation of 24h at 37°C, 5% CO2, the cell culture medium was discarded, and 50µL of supplemented lysis buffer #4 (1X) was added.

After 30min lysis at RT under gentle shaking, lysates were transferred into a low volume detection microplate as follows:

16µL of lysate for the detection of phospho-p62/SQSTM1 (S403).

4 µl of lysate, then 12 µL of supplemented lysis buffer #4 (1X) for the detection of total p62/SQSTM1

Finally, 4µL of the HTRF phospho (Ser403) or total p62/SQSTM1 detection reagents were added. The HTRF signal was recorded after an overnight incubation.

Whereas the expression of p62/SQSTM1 is evidenced in the untreated cell lines assessed here, its phosphorylation level is elevated in Neuro2A cells only.

Beside demonstrating the compatibility of both assays with human and mouse samples, these results suggest differences in p62/SQSTM1 behavior depending on the cellular background.

Phospho- & total p62/SQSTM1 on SH-SY5Y (120,000 cells / well),  Hela cells (100,000 cells / well) and Neuro2a cells (50,000 cells / well)

Bafilomycin A1 dose-response

Human HeLa and SH-SY5Y cells were plated at respectively 100,000 and 120,000 cells/well in a 96 well plate, and incubated 24h at 37°C, 5% CO2.

After overnight incubation with increasing concentrations of Bafilomycin A1, which is a well established autophagic flux blocker, the cell culture medium was removed, and cells were lysed with 50 µL of supplemented lysis buffer #4 (1X). After 30min lysis at RT under gentle shaking, lysates were transferred into a low volume detection microplate as follows:

16µL of lysate for the detection of phospho-p62/SQSTM1 (S403).

4 µl of lysate then 12 µL of supplemented lysis buffer #4 (1X) for the detection of total p62/SQSTM1.

Finally 4µL of the HTRF phospho (Ser403) or total p62/SQSTM1 detection reagents were added. The HTRF signal was recorded after an overnight incubation.

As expected, increasing concentrations of Bafilomycin A1 are associated with a dose dependent increase o, both expression and S403 phosphorylation of p62/SQSTM1.

Note that Bafilomycin EC50 is approximately 20nM, and comparable between Hela and SH-SY5Y cells.

Phospho- & total p62/SQSTM1 in HeLa cells (100,000 cells/well) Bafilomycin A1 dose-response experiment
Phospho- & total p62/SQSTM1 in SH-SY5Y cells (120,000 cells/well) Bafilomycin A1 dose-response experiment

Starvation 6h on HeLa cells

Human HeLa cells were plated at 100,000 cells/well in a 96 well plate. After 24h incubation, cell culture medium was removed and replaced by EBSS (an amino acid and vitamin deprived medium) or fresh culture medium for 6h.

Next, cells were lysed with 50 µL of supplemented lysis buffer #4 (1X). After 30min lysis at RT under gentle shaking, lysates were transferred into a low volume detection microplate as follows:

16µL of lysate for the detection of phospho-p62/SQSTM1 (S403).

4 µl of lysate, then 12 µL of supplemented lysis buffer #4 (1X) for the detection of total p62/SQSTM1.

Finally, 4µL of the HTRF phospho (Ser403) or total p62/SQSTM1 detection reagents were added. The HTRF signal was recorded after an overnight incubation.

As expected, amino acid deprivation conditions are associated with a decrease in total p62/SQSTM1 which results from an autophagy-induced degradation mechanism.

Phospho- & total p62/SQSTM1 in EBSS starved HeLa cells (100,000 cells/ well)

PP242 dose-response

Human HeLa cells and SH-SY5Y cells were plated at respectively 100,000 and 120,000 cells/well in a 96 well plate.

After cell treatment (Hela: 6H; SH-SY5Y: ON) with increasing concentrations of an autophagic inducer, PP242, the culture medium was removed.

Next, cells were lysed with 50 µL of supplemented lysis buffer #4 (1X). After 30 min lysis at RT under gentle shaking, lysates were transferred into a low volume detection microplate as follows:

16 µL of lysate for the detection of phospho-p62/SQSTM1 (S403).

4 µL of lysate, then 12 µL of supplemented lysis buffer #4 (1X) for the detection of total p62/SQSTM1.

Finally, 4 µL of the HTRF phospho (Ser403) or total p62/SQSTM1 detection reagents were added. The HTRF signal was recorded after an overnight incubation.

These results show that the p62/SQSTM1 level is reduced upon PP242 treatment, resulting from a degradation induced by the autophagic pathway.

Phospho- & total p62/SQSTM1 on HeLa cells (50,000 cells/well) PP242 dose-response experiment
Phospho- & total p62/SQSTM1 on SH-SY5Y cells (120,000 cells/well) PP242 dose-response

HTRF Total p62/SQSTM1 cellular assay compared to Western Blot

Human HeLa cells were grown for 2 days, until 80% confluency was reached. Then the cells were stimulated with MG-132 (4 µM) overnight before lysis with supplemented lysis buffer, and soluble supernatants were collected via centrifugation.

Serial dilutions of the cell lysate in supplemented lysis buffer #4 (1X) were performed, and 16µL of lysates were transferred into an HTRF low volume detection microplate prior to the addition of 4µL of HTRF total p62/SQSTM1 detection reagents.

A side by side comparison of Western Blot and HTRF demonstrates the HTRF assay is 4-fold more sensitive than the Western Blot, at least under these experimental conditions.

A side by side comparison of Western Blot and HTRF demonstrated that the HTRF assay is 8-fold more sensitive than the Western Blot.

Western Blot and HTRF sensitivity comparison on HeLa cells control lysate

Simplified pathway for p62/SQSTM1 assays

Autophagy is a physiological cellular process enabling the clearing out of misfolded or aggregated proteins, and damaged organelles like mitochondria, also called mitophagy. Activated upon oxidative stress, nutrient deprivation, infections (xenophagy), or during the development of cancers or neurodegenerative diseases, the autophagy pathway relies on key players such as the p62/SQSTM1, ATG proteins, or LC3.

p62 / SQSTM1 is an adaptor protein which is initially phosphorylated by ULK1 on Serine 407, then on Serine 403 by casein kinase 2 or TBK1. The phosphorylation on Ser403 increases its affinity for ubiquitin chains, thus enabling p62/SQSTM1 to bind to ubiquitinated cargo proteins. Ubiquitinated proteins or ubiquitin coated mitochondria associated with p62SQSTM1 proteins are taken away in phagosomes, whose content is cleared out after lysosomal fusion.

In addition, another p62/SQSTM1 phosphorylation residue has been reported on Ser349 upon oxidative stress or amino acid deprivation This phosphorylation event abrogates the interaction between Keap1 and the transcription factor Nrf2 which translocates into the nucleus, where it activates the transcription of antioxidant genes including p62/SQSTM1. In parallel, cytoplasmic Keap1 is captured by p62/SQSTM1 and is degraded by autophagic clearance.

Apart from the role of p62/SQSTM1 in addressing unwanted cargoes to autophagic clearance, other components are essential in the autophagy process. Among them are ULK1 and VSP34 complexes, as well as the conjugation machinery composed of the ATG protein family and LC3-II which are sequentially involved in the formation of phagophores. Phagophores evolve to autophagosomes which fuse with lysosomes, giving rise to autolysosomes where enzymes like protease or phosphatases are active.

Simplified pathway for p62/SQSTM1 assays
Best practices for analyzing brain samples with HTRF® phospho assays for neurosciences

Insider Tips for successful sample treatment - Technical Notes

Optimize your HTRF cell signaling assays on tissues

HTRF and WB compatible guidelines - Technical Notes

Best practices for analyzing tumor xenografts with HTRF phospho assays

Protocol for tumor xenograft analysis with HTRF - Technical Notes

Key guidelines to successful cell signaling experiments

Mastering the art of cell signaling assays optimization - Guides

HTRF® cell signaling platform combined with iCell® Hepatocytes

A solution for phospho-protein analysis in metabolic disorders - Posters

HTRF phospho-assays reveal subtle drug-induced effects

Detailed protocol and direct comparison with WB - Posters

Universal HTRF® phospho-protein platform: from 2D, 3D, primary cells to patient derived tumor cells

Analysis of a large panel of diverse biological samples and cellular models - Posters

HTRF phospho assays reveal subtle drug induced effects in tumor-xenografts

Tumor xenograft analysis: HTRF versus Western blot - Application Notes

HTRF cell-based phospho-protein data normalization

Valuable guidelines for efficiently analyzing and interpreting results - Application Notes

HTRF phospho-total lysis buffer: a universal alternative to RIPA lysis buffers

Increased flexibility of phospho-assays - Application Notes

HTRF Alpha-tubulin Housekeeping kit

Properly interpret your compound effect - Application Notes

Simplified pathway dissection with HTRF phospho-assays and CyBi-felix liquid handling

Analyse of PI3K/AKT/mTor translational control pathway - Application Notes

How to run a cell based phospho HTRF assay

What to expect at the bench - Videos

Side-by-side comparison of HTRF, Western Blot, ELISA and AlphaScreen® SureFire®

Do all cell-based kinase assays perform similarly? - Posters

Unleash the potential of your phosphorylation research with HTRF

A fun video introducing you to phosphorylation assays with HTRF - Videos

How to run a cell based phospho HTRF assay

3' video to set up your Phospho assay - Videos

Cisbio Product Catalog 2019

All your HTRF assays in one document! - Catalog

A guide to Homogeneous Time Resolved Fluorescence

General principles of HTRF - Guides

How HTRF compares to Western Blot and ELISA

Get the brochure about technology comparison. - Brochures

HTRF cellular phospho-protein assays

Physiologically relevant results fo fast flowing research - Flyers

tab6

Latest news